1. Milačić R, Ščančar J, Paunović M, editors. The Sava River. Berlin, Heidelberg: Springer-Verlag; 2015. 506 p.
  2. Crnobrnja-Isailović J, Paunović M. Conservation and Decline of European Amphibians: The Republic of Serbia. In: Heatwole H, Wilkinson JW, editors. Conservation and Decline of European Amphibians: The Republic of Serbia. Exter: Pelagic Publishing; 2014. p 45–55.
  3. Paunović M, Simonović P, Simić V, Simić S. Danube in Serbia – Joint Danube Survey 2. Directorate for Water Management. Belgrade; 2010. 339 p.
  4. Panov V, Alexandrov B, Arbaciauskas K, Binimelis R, Copp GH, Grabowski M, Lucy F, Leuven R, Nehring S, Paunović M, Semenchenko V, Son M. Risk Assessment of Aquatic Invasive Species Introductions via European Inland Waterways. In: Settele J, Penev L, Georgiev T, Grabaum R, Grobelnik V, Hammen V, Klotz S, Kotarac M, Kuhn I, editors. Atlas of Biodiversity Risk. Sofia: Pensoft Publishers. 2010. p 140-3.
  5. Sommerwerk N, Hein T, Schneider-Jakoby M, Baumgartner C, Ostojić A, Paunović M, Bloesch J, Siber R, Tockner K. The Danube River Basin. In: Tockner K, Uehlinger U, Robinson CT, editors. Rivers of Europe. San Diego: Elsevier, Academic Press. 2009. p. 59-112.
  6. Zorić K, Szekeres J, Csányi B, Kolarević S, Marković V, Paunović M. Distribution of alien Bryozoan species, Pectinatella magnifica (Leidy 1851), in the river Danube. Acta Zool Bulg. 2015;67(2):241-7.
  7. Gačić Z, Kolarević S, Sunjog K, Kračun-Kolarević M, Paunović M, Knežević-Vukčević J, Vuković-Gačić B. The impact of in vivo and in vitro exposure to base analogue 5-FU on the level of DNA damage in haemocytes of freshwater mussels Unio pictorum and Unio tumidus. Environ Pollut. 2014;191:145–50.
  8. Marković V, Tomović J, Ilić M, Kračun-Kolarević M, Novaković B, Paunović M, Nikolić V. Distribution of the species of Theodoxus Montfort, 1810 (Gastropoda: Neritidae) in Serbia: An overview. Acta Zool Bulg. 2014;66(4):477–84.
  9. Marković V, Tomović J, Atanacković A, Kračun-Kolarević M, Ilić M, Nikolić V, Paunović M. Macroinverebrate communities along the Velika Morava River. Turk J Zool. 2014;39:210-24.
  10. Milošević D, Simić V, Stojković M, Čerba D, Mančev D, Petrović A, Paunović M. Spatio-temporal pattern of the Chironomidae community: toward the use of non-biting midges in bioassessment programs. Aquat Ecol. 2012;47(1):37–55.
  11. Navarro-Ortega A, Acuña V, Bellin A, Burek P, Cassiani G, Choukr-Allah R, Dolédec S, Elosegi A, Ferrari F, Ginebreda A, Grathwohl P, Jones C, Rault PK, Kok K, Koundouri P, Ludwig RP, Merz R, Milacic R, Muñoz I, Nikulin G, Paniconi C, Paunović M, Petrovic M, Sabater L, Sabaterb S, Skoulikidis NT, Slob A, Teutsch G, Voulvoulis N, Barceló D. Managing the effects of multiple stressors on aquatic ecosystems under water scarcity. The GLOBAQUA project. Sci Total Environ. 2015;503-504:3–9.
  12. Tomović J, Paunović M, Atanacković A, Marković V, Gačić Z, Csányi B, Sinuć V. Biotic typology of the Danube River based on distribution of mollusc fauna as revealed by the Second Joint Danube Survey (2007). Acta Zool Bulg. 2014;66(4):527–37.
  13. Zorić K, Simonović P, Dikanović V, Marković V, Nikolić V, Simić V, Paunović M. Checklist of non-indigenous fish species of the River Danube. Arch Biol Sci. 2014;66(2):629–39.
  14. Milošević Đ, Stojković M, Čerba D, Petrović A, Paunović M, Simić V. Different aggregation approaches in the chironomid community and the threshold of acceptable information loss. Hydrobiologia. 2014;727(1):35–50.
  15. Tomovic J, Zoric K, Simic V, Kostic M, Kljajic Z, Lajtner J, Paunovic M. The first record of the Chinese pond mussel Sinanodonta woodiana (Lea, 1834) in Montenegro. Arch Biol Sci. 2013;65(4):1525–31.
  16. Tubić BP, Simić VM, Zorić KS, Gačić ZM, Atanacković AD, Csányi BJ, Paunović MM. Stream section types of the Danube River in Serbia according to the distribution of macroinvertebrates. Biologia (Bratisl). 2013;68(2):294–302.
  17. Aborgiba M, Kostić J, Kolarević S, Kračun-Kolarević M, Elbahi S, Knežević-Vukčević J, Lenhardt M, Paunović M, Gačić Z, Vuković-Gačić B. Flooding modifies the genotoxic effects of pollution on a worm, a mussel and two fish species from the Sava River. Sci Total Environ. 2016;540:358-67.
  18. Raković J.M., Raković B.M., Petrović A., Popović N., Đuknić J., Naunović Z., Paunović M. Haplotype variation in the Physa acuta group (Basommatophora): genetic diversity and distribution in Serbia. Mediterr Mar Sci. 2016;17(1):292-301.
  19. Popović N., Đuknić J., Čanak-Atlagić J, Raković M., Tubić B., Anđus S., Paunović M.The relation between chironomid (Diptera: Chironomidae) assemblages and environmental variables: The Kolubara River case study. Arch Biol Sci. 2016;68(2):405-15.